1)
Using the Mainen-provided
model, reproduce the Stuart and Sakmann (1994) results
(figure 2a bottom) through a manipulation of just the axonal Na+
channel density. Plot the amplitude of the back propagating spike as a function
of axonal Na+ conductance, highlighting the point where the Stuart
and Sakmann (1994) results are reproduced. Does your estimate of where the Stuart and Sakmann results are reproduced match what was found by Mainen et al. (1995)? Indicate on your plot the density which they concluded would reproduce the result.
2)
Implement the Colbert and Pan (2002) finding (-7 mV shift in Na+
channel activation voltage dependence) and generate a new plot, again
highlighting the point where the Stuart and Sakmann
results are reproduced. You may want to edit the .mod file for the Na+ channels to achieve this.
Does it matter whether or not the shift is implemented
only in the axonal segments (axon, hillock, and initial segment), or is it
sufficient to just shift the voltage dependence in the whole cell? Explain your
answer.
3)
Use the model of Colbert and Pan (2002), from step 2, but instead
of injecting current into the soma, inject it directly into the initial
segment. Under the conditions you found in question one to reproduce the Stuart
and Sakmann (1994) results, can you generate a fully back-propagating spike? Under
the conditions you found in question two to reproduce the Stuart and
Sakmann (1994) results, can you generate a back-propagating spike? If you can, are there any conditions you can find or manipulations you can make such that an action potential is generated at the initial segment but does NOT back-propagate to the dendrite?
Colbert, CM, Pan, E (2002) Ion channel properties underlying axonal action potential initiation in pyramidal neurons. Nature neuroscience, 5:533–538.
Mainen, ZF, Joerges, J, Huguenard, JR, Sejnowski, TJ (1995) A model of spike initiation in neocortical pyramidal neurons. Neuron, 15:1427–1439.
Stuart, GJ, Sakmann, B (1994) Active propagation of somatic action potentials into neocortical pyramidal cell dendrites. Nature, 367:69–72.
References
(N.B. that you do NOT need to read these references thoroughly to complete the problem set, though you will need to consult Mainen et al. for question #1.)